| Application Areas |
|---|
| Target Identification | Prioritization |
| Systems Biology |
| Safety & Toxicity Profiling |
| Clinical Trial Analysis |
| Drug Repurposing |
| Cheminformatics |
| Knowledgebases |
|---|
| NetProTM |
| CliProTM >> |
CliPro™ is a comprehensive, easy to access knowledgebase of proteins in various biological sources that reflects alterations between normal versus diseased conditions, manually mined from literature.
The knowledgebase currently includes a vast repertoire of clinically significant proteins with their concentration values under various pathological states, with an emphasis on functional and diagnostic utility. CliPro™ would serve as an effective platform to identify novel protein-disease associations and validate new potential biomarker-disease associations.
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Protein : can be searched using public identifiers
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Disease : can be searched using MeSH or common disease term
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Biomarker : can be searched based on biomarker type
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BioFluid : can be searched based on the biological fluid
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Protein Type: can be searched based on function and/or occurrence
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Plasma Catalogue: provides a concise report of the protein across diseases
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Specialized platform to validate mass spectrometry and high-throughput proteomics data using the pre-annotated information from the literature.
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Provides a good repertoire of biomarker-disease associations for novel biomarker prediction and validation.
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Customized datasets for proteins from various biological fluids including serum/plasma, cerebrospinal fluid, synovial fluid, amniotic fluid, urine, tears.
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Enables comparison between protein concentration levels of disease oriented studies and normal/control studies.
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The knowledgebase also contains information on post-translational modifications, genetic variations associated with disease.
Human plasma proteome module
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Covers all classes of protein from highly abundant classical plasma protein to aberrantly secreted proteins, cytokines/receptor ligands.
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With annotations on influence of factors such as genetics, age, sex, physiological state, diseases on altered levels the protein in the human plasma.
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Annotated with post translational modifications, variation information associated with a disease.
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Ontology for various data fields such as Biomarker, BioFluid, Disease, Pathological State, Clinical Outcome, GO making it easier for the data to be accessed and filtered across various entities.
